High-Performance Computational Solutions in Protein Bioinformatics

By:

Dariusz Mrozek

Format:

Paperback / softback

Series:

Springerbriefs in Computer Science

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Description

Recent developments in computer science enable algorithms previously perceived as too time-consuming to now be efficiently used for applications in bioinformatics and life sciences. This work focuses on proteins and their structures, protein structure similarity searching at main representation levels and various techniques that can be used to accelerate similarity searches. Divided into four parts, the first part provides a formal model of 3D protein structures for functional genomics, comparative bioinformatics and molecular modeling. The second part focuses on the use of multithreading for efficient approximate searching on protein secondary structures. The third and fourth parts concentrate on finding 3D protein structure similarities with the support of GPUs and cloud computing. Parts three and four both describe the acceleration of different methods. The text will be of interest to researchers and software developers working in the field of structural bioinformatics and biomedical databases.

Release date Australia

July 1st, 2014

Author

Dariusz Mrozek

Audience

Professional & Vocational

Illustrations

21 Illustrations, color; 35 Illustrations, black and white; XIX, 109 p. 56 illus., 21 illus. in color.

Pages

109

Series

Springerbriefs in Computer Science

Dimensions

155x235x7

ISBN-13

9783319069708

Product ID

22324572

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